GenomiPhi™文献リスト

GenomiPhi™を利用して発表された文献をご紹介しております。

Single Cell

• Optimization and evaluation of single-cell whole-genome multiple displacement amplification.
  Spits et al.
  Hum Mutat. 2006 May;27(5):496-503

細菌

• Genetic organization of the psbAD region in phages infecting marine Synechococcus strains.
  Millard et al.
  PNAS,Jul 2004; 101: 11007 - 11012
• Microbial populations of the river-recharged Fredericton aquifer.
  Haveman et al.
  Geomicrobiology Journal. 22, 311-324 2005
• Multiple displacement amplification as a pre-polymerase chain reaction (pre-PCR) to process difficult to amplify samples and low copy number sequences from natural environments.
  Gonzalez et al.
  Environmental Microbiology (2005) 7(7) 1024-1028
• Whole genome amplification, cloning, and expression of an exonuclease III gene
  application note
• Automation of TempliPhi™ and GenomiPhi™ DNA Amplification Kits on the Genesis Freedom™ Robotic Sample Processor
  application note
• Use of GenomiPhi™ DNA Amplification Kit for array CGH
  application note

血液

• A 77 kb region of chromosome 6p22.2 is associated with dyslexia in families from United Kingdom and from the United States.
  Francks et al.
  Am. J. Hum. Genet. 75 :1046-1058, 2004
• Allelic imbalance analysis by high-density single-nucleotide polymorphic allele (SNP) array with whole genome amplified DNA.
  Wong et al.
  Nucleic Acids Res., May 2004; 32: 69
• Evaluation of multiple displacement amplification in a 5 cM STR genome-wide scan.
  Dickson et al.
  Nucleic Acids Research, July 2005, 33(13): e119
• Exploring whole genome amplification as a DNA recovery tool for molecular genetic studies.
  Holbrook et al.
  Journal of Biomolecular Techniques, June 2005; 16(2): 125-133
• Two novel missense mutations in G protein-coupled receptor 54 in a patient with hypogonadotropic hypogonadism.
  Semple et al.
  J. Clin. Endocrinol. Metab., Mar 2005; 90: 1849 - 1855
• Reliable STR and SNP genotyping of whole genome amplified DNA, decode genetics
  scientific poster
• STR analysis of GenomiPhi™ amplified DNA from blood on ALF Express
  scientific poster

Blood / blood spots

• Intestinal inflammation-induced growth retardation acts through IL-6 in rats and depends on the -174 IL-6 G/C polymorphism in children.
  Sawczenko et al.
  PNAS, Sep 2005; 102: 13260 - 13265

Blood cards

• Whole genome amplification from blood cards
  application note

Frozen blood

• Molecular typing of human leukocyte antigen and related polymorphisms following whole genome amplification.
  Shao et al.
  Tissue Antigens Volume 64 Issue 3 Page 286 - September 2004 doi:10.1111/j.0001-2815.2004.00295.x

Plasma

• Comparison of archival plasma and formalin-fixed paraffin-embedded tissue for genotyping in hepatocellular carcinoma.
  Sjoholm et al.
  Cancer Epidemiology, Biomarkers and Prevention 2005 14 (1) 251-255

Whole blood

• Whole genome amplification from crude blood lysates
  application note

Whole blood / blood cards

• Comparing whole-genome amplification methods and sources of biological samples for single-nucleotide genotyping.
  Park et al.
  Clinical chemistry 51 (8) 2005 1520-1523

口腔試料

• A 77 kb region of chromosome 6p22.2 is associated with dyslexia in families from United Kingdom and from the United States.
  Francks et al.
  Am. J. Hum. Genet. 75 :1046-1058, 2004
• Assessment of multiple displacement amplification for polymorphism discovery and haplotype determination at a highly polymorphic locus, MC1R.
  Murthy et al.
  Human Mutation, June 2005; 26(2): 1-8
• Comparing whole-genome amplification methods and sources of biological samples for single-nucleotide genotyping.
  Park et al.
  Clinical chemistry 51 (8) 2005 1520-1523
• Estimation of the rate on SNP genotyping errors from DNA extracted from different tissues.
  Montgomerey et al.
  Twin Research and Human Genetics. 8 (4) 346-352 (2005)
• Mutation screening and association analysis of six candidate genes for autism on chromosome 7q.
  Bonora et al.
  European Journal of Human Genetics. (2005) 13, 198-207
• Phenylketonuria screening registry as a resource for population genetic studies.
  Hannelius et al.
  J. Med. Genet. 2005 42 e60
• Whole genome amplification from cheek cells
  application note
• Reliable STR and SNP genotyping of whole genome amplified DNA, Decode Genetics
  scientific poster

植物

• Amplification of plant genomic DNA by Phi29 DNA polymerase for use in physical mapping of the hypermethylated genomic region.
  Adachi et al.
  Plant Cell Rep. 2004 May 28
• Amplification of plant DNA with GenomiPhi™ DNA Amplification Kit
  application note

精製済みゲノムDNA

• Alu insertion loci and platyrrhine primate phylogeny.
  Ray et al.
  Molecular Phylogenetics and Evolution. 2005. Volume 35, Issue 1, April 2005, Pages 117-126
• Comparing whole-genome amplification methods and sources of biological samples for single-nucleotide genotyping.
  Park et al.
  Clinical chemistry 51 (8) 2005 1520-1523
• Molecular typing of human leukocyte antigen and related polymorphisms following whole genome amplification.
  Shao et al.
  Tissue Antigens Volume 64 Issue 3 Page 286 - September 2004 doi:10.1111/j.0001-2815.2004.00295.x
• Amplified DNA for use in STR analysis
  application note
• Automation of TempliPhi™ and GenomiPhi™ DNA Amplification Kits on the Genesis Freedom™ Robotic Sample Processor
  application note
• Use of amplified DNA as a substrate for uniplex PCR
  application note
• Use of amplified DNA as a substrate for multiplex PCR
  application note
• Use of amplified DNA with GeneChip HuSNP mapping assay
  application note
• GenomiPhi™ amplified DNA on BAC CGH microarrays
  scientific poster
• GenomiPhi™ whole genome amplification - amplification of human genomic DNA from a limited source
  scientific poster

土壌

• Using GenomiPhi™ DNA Amplification Kit for the representative amplification of microbial metagenomes
  scientific poster

組織試料

• Allelic imbalance analysis by high-density single-nucleotide polymorphic allele (SNP) array with whole genome amplified DNA.
  Wong et al.
  Nucleic Acids Res, May 2004; 32: 69
• Whole-genome analyses of loss of heterozygosity and methylation analysis of four tumour-suppressor genes in N-methyl-N'-nitro-N-nitrosoguanidine-induced rat stomach carcinomas.
  Niwa et al.
  Cancer Science 2006 96 (7) 409-413

Frozen / Formalin fixed, paraffin embedded

• Allelic imbalance analysis of oral tongue squamous cell carcinoma by high-density single nucleotide polymorphism arrays using whole-genome amplification.
  Zhou et al.
  Hum. Genet (2005) DOI 10.1007/s00439-005-0069-x
• Amplification of whole tumor genomes and gene-by-gene mapping of genomic aberrations from limited sources of fresh-frozen and paraffin-embedded DNA.
  Bredel et al.
  Mol. Diagn., May 2005; 7: 171 - 182

Formalin fixed, paraffin embedded

• Chronic raumatic encephalopathy in a National Football League player.
  Omalu et al.
  Neurosurgery July 2005; 57(1), 128-134
• Comparison of archival plasma and formalin-fixed paraffin-embedded tissue for genotyping in hepatocellular carcinoma.
  Sjoholm et al.
  Cancer Epidemiology,Biomarkers and Prevention 2005 14 (1) 251-255
• DNA extraction from bovine mummified fetuses and detection of factor XI gene deficiency in the mummies.
  Ghanem et al.
  J Reprod Dev, Jun 2005; 51(3): 347-52
• GenomiPhi™ amplification of FFPE tissue DNA for array CGH
  application note

Laser capture microdissection

• Detection of mutations in whole genome-amplified DNA from laser-microdissected neurons.
  Pamphlett et al.
  J Neurosci Methods, Aug 2005; 147(1): 65-7
• Evolutionary conservation of the clk-1-dependent mechanism of longevity: loss of mclk1 increases cellular fitness and lifespan in mice.
  Liu et al.
  Genes & Dev., Sep 2005; 10.1101/gad.1352905
• Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH.
  Cardoso et al.
  Nucleic Acids Res., Oct 2004; 32: 146
• Single-cell analysis of loss of heterozygosity at the ATM gene locus in Hodgkin and Reed-Sternberg cells of Hodgkin's lymphoma: ATM loss of heterozygosity is a rare event.
  Lespinet et al.
  International Journal of Cancer Volume 114, Issue 6 , Pages 909 - 916, 2005
• Whole Genome Amplification of DNA from laser capture micordissected tissue for high throughout single nucleotide polymorphism and short tandem repeat genotyping.
  Rook et al.
  American Journal of Pathology 164 (1) 23-33 (2004)

Degraded/ Irradiated DNA / Mouthwash

• Effects of electron-beam irradiation on whole genome amplification.
  Bergen et al.
  Cancer Epidemiology, Biomarkers and Prevention 2005 14 (4) 1016-1019

その他

Dialysate samples

• Genotyping: a new application for the spent dialysate in peritoneal dialysis.
  Gillerot et al.
  Nephrol. Dial. Transplant., May 2004; 19: 1298 - 1301

Lymphoblast cultures

• Exploring whole genome amplification as a DNA recovery tool for molecular genetic studies.
  Holbrook et al.
  Journal of Biomolecular Techniques, June 2005; 16(2): 125-133

Nematodes

• Multiple displacement amplification of total genomic DNA from Meloidogyne spp. and comparison to crude DNA extracts in PCR of ITS1, 28S, D2-D3 rDNA and Hsp90.
  Skantar et al.
  Nematology 2005 Vol 00 (0) 1-9
• A genetic linkage map of the soybean cyst nematode Heterodera glycines.
  Atibalentja et al.
  Molecular Genetics and Genomics, May 2005; 273(3): 273-281

Neurosphere culture

• Accumulation of mutation and somatic selection in aging neural stem/progenitor cells.
  Bailey et al.
  Aging Cell (2004) 3 391-397

Phage

• Genetic organization of the psbAD region in phages infecting marine Synechococcus strains.
  Millard.
  PNAS, Jul 2004; 101: 11007 - 11012

Plasmid

• Usefulness of repeated GenomiPhi™, a Phi29 DNA polymerase-based rolling circle amplification kit, for generation of large amounts of plasmid DNA.
  Sato et al.
  Biomolecular Engineering 22 (2005) 129-132

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